PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT53916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 195aa MW: 20851.9 Da PI: 6.6694 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 40.9 | 4.5e-13 | 74 | 117 | 57 | 101 |
NF-YC 57 eltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 elt+rsw + enkrr l+k di++a++r +ifdflvdiv +de+ PHT53916.1 74 ELTFRSWFNM-ENKRRMLQKKDITKAIERIEIFDFLVDIVLKDEI 117 79*****975.799****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MGGECSGNSL VPNAGTLLPS STAATGTIGG KCSGGDWILD VGTLLPTPSA VAEGMGTGRT 60 TTGGGVLDLP AQGELTFRSW FNMENKRRML QKKDITKAIE RIEIFDFLVD IVLKDEIREE 120 GTGFGPSMLG STSSGVQNFY PPIGQTAAPS EAMIRRIATS GVQNFYPPMG QTAPSEVMIR 180 RTVMPRVFPF VYIQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 8e-24 | NF-YC family protein |