PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53914.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 439aa    MW: 48528 Da    PI: 5.1472
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53914.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC132.21.7e-412363382101
       NF-YC   2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                 l++fw+ q   i+++++fkn++lPlar+k+++k +edv ++s eaP+l++kace+fi eltlrsw ++eenkrr ++k d+a+a++rt+ fdflvdiv 
  PHT53914.1 236 LEAFWACQlkeINETNNFKNNKLPLARVKRLMKDNEDVCKVSGEAPMLMAKACEMFIQELTLRSWFNTEENKRRMVQKKDVAKAIERTELFDFLVDIVH 334
                 789**9987779999************************************************************************************ PP

       NF-YC  98 rdel 101
                 +de+
  PHT53914.1 335 KDEI 338
                 9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MENTSKNSSE NAVAGGGCPM QESHYHLQQP EGQKSAVNAA GAAAAGYPMQ VPYHHILQRQ  60
QQREQQSAVN AAAAAAAGYP LQVPYYQLQQ QQQQLEQQSV GSVEAAAESG YPLQVPYYQL  120
LQQQQQQEQE QPLTENAAAA AAVAAATGYP LQVPYYQLLQ QQQQEQRLEE NAAAAGYPME  180
VPYYHVLQQQ QEQQLGENAV AAAAAAAGYP LQVPYNQLLQ HHHHHHQKEQ EQQQKLEAFW  240
ACQLKEINET NNFKNNKLPL ARVKRLMKDN EDVCKVSGEA PMLMAKACEM FIQELTLRSW  300
FNTEENKRRM VQKKDVAKAI ERTELFDFLV DIVHKDEISE EGAGFGPSML GSTSSDVQNA  360
HPPMGQTAPS EVMIRGTASS GIQNFNPPMG QTAPSEVMIR STAKPRVYPS VYAQPQAWQV  420
AEDKTIASGE SSAQGNVND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.27e-51NF-YC family protein