PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT53914.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YC

Protein Properties

Length: 439aa MW: 48528 Da PI: 5.1472

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT53914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	132.2	1.7e-41	236	338	2	101
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 l++fw+ q i+++++fkn++lPlar+k+++k +edv ++s eaP+l++kace+fi eltlrsw ++eenkrr ++k d+a+a++rt+ fdflvdiv PHT53914.1 236 LEAFWACQlkeINETNNFKNNKLPLARVKRLMKDNEDVCKVSGEAPMLMAKACEMFIQELTLRSWFNTEENKRRMVQKKDVAKAIERTELFDFLVDIVH 334 7899987779999********************************************************************************** PP NF-YC 98 rdel 101 +de+ PHT53914.1 335 KDEI 338 9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MENTSKNSSE NAVAGGGCPM QESHYHLQQP EGQKSAVNAA GAAAAGYPMQ VPYHHILQRQ 60 QQREQQSAVN AAAAAAAGYP LQVPYYQLQQ QQQQLEQQSV GSVEAAAESG YPLQVPYYQL 120 LQQQQQQEQE QPLTENAAAA AAVAAATGYP LQVPYYQLLQ QQQQEQRLEE NAAAAGYPME 180 VPYYHVLQQQ QEQQLGENAV AAAAAAAGYP LQVPYNQLLQ HHHHHHQKEQ EQQQKLEAFW 240 ACQLKEINET NNFKNNKLPL ARVKRLMKDN EDVCKVSGEA PMLMAKACEM FIQELTLRSW 300 FNTEENKRRM VQKKDVAKAI ERTELFDFLV DIVHKDEISE EGAGFGPSML GSTSSDVQNA 360 HPPMGQTAPS EVMIRGTASS GIQNFNPPMG QTAPSEVMIR STAKPRVYPS VYAQPQAWQV 420 AEDKTIASGE SSAQGNVND

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MENTSKNSSE NAVAGGGCPM QESHYHLQQP EGQKSAVNAA GAAAAGYPMQ VPYHHILQRQ  60
QQREQQSAVN AAAAAAAGYP LQVPYYQLQQ QQQQLEQQSV GSVEAAAESG YPLQVPYYQL  120
LQQQQQQEQE QPLTENAAAA AAVAAATGYP LQVPYYQLLQ QQQQEQRLEE NAAAAGYPME  180
VPYYHVLQQQ QEQQLGENAV AAAAAAAGYP LQVPYNQLLQ HHHHHHQKEQ EQQQKLEAFW  240
ACQLKEINET NNFKNNKLPL ARVKRLMKDN EDVCKVSGEA PMLMAKACEM FIQELTLRSW  300
FNTEENKRRM VQKKDVAKAI ERTELFDFLV DIVHKDEISE EGAGFGPSML GSTSSDVQNA  360
HPPMGQTAPS EVMIRGTASS GIQNFNPPMG QTAPSEVMIR STAKPRVYPS VYAQPQAWQV  420
AEDKTIASGE SSAQGNVND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63470.2	7e-51	NF-YC family protein