PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53828.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 319aa    MW: 35394.4 Da    PI: 7.1064
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.67.4e-4062122262
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                 +++++kcprCdst+tkfCyynnysl+qPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s
  PHT53828.1  62 HDHSIKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 122
                 57889*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGITSLQVCM DSSDWLQGTI HEDVAAGVVM DSSSSPSGGD HHINLTCSRP IIVDQRRLRP  60
PHDHSIKCPR CDSTHTKFCY YNNYSLTQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK  120
VSSKKSNTNE TLATNNNNQN LPEPEMPFPL HNHHFMSGTS NFVHHGNFML DQNQAPIIDF  180
MESKYEALVG SSSRNQDLFL GNGDNNIGMM SNAGFGHDNI IAPNFPFGMA SMNMDNVNNF  240
GMLLPYENNH HHHEELQSIN NAVDVKPNPK ILSLEWHDQA GNKESSFGYN YSGSSTGGLG  300
SWTGLMNGCY GSSTTNPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.12e-51Dof family protein