PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT53430.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 311aa MW: 33797.2 Da PI: 9.3324

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT53430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.6	3.3e-39	35	95	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ke+a++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s+ PHT53430.1 35 KEQAINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSN 95 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MDTSQWPQGI GVVKGVEPSS NAVVLPDQRK PRPQKEQAIN CPRCNSTNTK FCYYNNYSLS 60 QPRYFCKTCR RYWTEGGSLR NVPVGGGSRK NKRSNNNSNN NNNSSSSNSS STSSSLSSSK 120 KFLSDLANPN DLNLTYNPIS ATAAVATTST AGNFSNFSEF MALPLIHPAN STSSFMPNNL 180 YTSSTGLPNL HDLKSSSLNF SLDGFENGYG SLQGGDQEAK LFFPMDDLKI NVSTANDQFE 240 ENREQAAADQ SNGFWNGMLG GGGSSCYGAR LEARPRVRNL KHCGDAKYQK ANALKFGAFA 300 KTLGHSPKHE T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-38	Dof family protein