PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53086.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 215aa    MW: 23844 Da    PI: 6.2807
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1859109155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +  +g+Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  PHT53086.1  59 PVYRGVRKRN-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 109
                 68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MNIFRSYYSD PLTESSSSFS DSSIYSPNRA IFSDEEVILA SNNPKKPAGR KKFRETRHPV  60
YRGVRKRNSG KWVCEVREPN KKSRIWLGTF PTAEMAARAH DVAAIALRGR SACLNFADSA  120
WRLPVPASSD TKDIQKAAAE AAEAFRPLKL EGISIESSSS TPESMFFMDE EALFCMPGLL  180
TNMAEGLMLP PPQCAEIGDH VETVDADTPL WSYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.12e-72ERF family protein