PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52869.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 154aa    MW: 17576.2 Da    PI: 7.3472
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.16.9e-211364256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f taeeAa+a+++a+ +l+g+
  PHT52869.1 13 KYRGIRRRP-WGKYAAEIRDPNRNG--ARLWLGTFETAEEAARAYDRAAFSLRGH 64
                8********.**********96665..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MENEDHRGRR ENKYRGIRRR PWGKYAAEIR DPNRNGARLW LGTFETAEEA ARAYDRAAFS  60
LRGHQAILNF PNDGHYHINN STNVPLGPGP SYAPSTTGSM HMSSSSASGC SDHRQENVGH  120
DHEEKVEFEY LDSNLLDELL GSQVHRQENK RPKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.16e-30ERF family protein