PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52857.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 290aa MW: 33314.6 Da PI: 6.2403

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	7.1e-50	10	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrF P+deelv++yL kk++++++ ++ e+d++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ +++ PHT52857.1 10 LPPGFRFYPSDEELVCHYLFKKIANEEVLK-GTLVEIDLHTCEPWQLPEVAKLNSSEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPkTRT 107 79**********************9655.78***********87788899**********************************85566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 vg++ktLvfy +rap+g kt W+mhe+rle PHT52857.1 108 IVGMRKTLVFYMNRAPNGIKTGWIMHEFRLE 138 7*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MGLRDIGATL PPGFRFYPSD EELVCHYLFK KIANEEVLKG TLVEIDLHTC EPWQLPEVAK 60 LNSSEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRTV VDPKTRTIVG MRKTLVFYMN 120 RAPNGIKTGW IMHEFRLENP HIPPKEDWVL CRVFHKTKAE NNSNNNNNNV LSPQNMYEVG 180 VNSPHNMDQS HALPYVGPRP MAATAFSQRP VNNQSQKLFD LLEPNHNPSS YLQLMSQEMK 240 APPSNDQMVE DDEYGFLLDM NFENPNIQDG GVHSSIGDMK FDDENSLVFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	8e-93	NAC family protein