PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52728.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 428aa MW: 47909.2 Da PI: 8.7566

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.5	1.5e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl PHT52728.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.2	8.1e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ PHT52728.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MFHAKKPSTM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSVK DGDRATSLEL QRNSASSSGM 120 IGRNMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQTI LEKACQTLGG EENMALPART 180 FKGIGNQGGL IPDISAAFKE FGTPPLSFSS FQDLNICGGH DQQLELHAQS SLGERSSSFD 240 GFMNLGNTTD HNLTLGKKRP SPYSSNGGNS NGKSPFMWSD DFRLQELGVA TAAALGPNNE 300 DDHQIIQMER SCNPELDSVS DLYESKPILQ EEKKCDAKLE RPSPRRAAQI SSLSAQGGRS 360 SVFGKHNNYW PYHAYQMNSV FYCDISKAHA MAKIALQKQN DDLEKKLDIQ FLAPVKENQS 420 RKVKKVEA

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MFHAKKPSTM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSVK DGDRATSLEL QRNSASSSGM  120
IGRNMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQTI LEKACQTLGG EENMALPART  180
FKGIGNQGGL IPDISAAFKE FGTPPLSFSS FQDLNICGGH DQQLELHAQS SLGERSSSFD  240
GFMNLGNTTD HNLTLGKKRP SPYSSNGGNS NGKSPFMWSD DFRLQELGVA TAAALGPNNE  300
DDHQIIQMER SCNPELDSVS DLYESKPILQ EEKKCDAKLE RPSPRRAAQI SSLSAQGGRS  360
SVFGKHNNYW PYHAYQMNSV FYCDISKAHA MAKIALQKQN DDLEKKLDIQ FLAPVKENQS  420
RKVKKVEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-124	G2-like family protein