PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52667.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 350aa MW: 40574.6 Da PI: 7.2696

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.2	8.9e-55	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kk++ +k++l +vikevd+yk+ePwdL++ ++ aee+ ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k PHT52667.1 7 VPPGFRFHPTDEELVDYYLRKKITLRKIDL-DVIKEVDLYKIEPWDLQElcRIGAEEQhEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYS-K 103 69**************************.9***********954555554445**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 + l+g++ktLvfykgrap+g k+dW+mheyrle PHT52667.1 104 HDLIGMRKTLVFYKGRAPHGLKSDWIMHEYRLE 136 899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MNAFSHVPPG FRFHPTDEEL VDYYLRKKIT LRKIDLDVIK EVDLYKIEPW DLQELCRIGA 60 EEQHEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PHGLKSDWIM HEYRLETDPN GAPQAKGWVV CRVFKKKMVS TRKESEEESP KWYENNDPVS 180 FMPDNIDSPK QQHCQSNYPC KKELLDMHYQ IPVTPSHHQQ FLQLPLLENP KFLPAPPSTS 240 ISVFGINVNN NSHGSSSLQQ SFSVLTRENV HMYPHPDNST NEQVTDWRVL HKFVASQLSQ 300 EEVSKENVYS NTFHGATNDS NLVVRDLNKQ ETVTENNSTA SSCSEIDLWK

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MNAFSHVPPG FRFHPTDEEL VDYYLRKKIT LRKIDLDVIK EVDLYKIEPW DLQELCRIGA  60
EEQHEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PHGLKSDWIM HEYRLETDPN GAPQAKGWVV CRVFKKKMVS TRKESEEESP KWYENNDPVS  180
FMPDNIDSPK QQHCQSNYPC KKELLDMHYQ IPVTPSHHQQ FLQLPLLENP KFLPAPPSTS  240
ISVFGINVNN NSHGSSSLQQ SFSVLTRENV HMYPHPDNST NEQVTDWRVL HKFVASQLSQ  300
EEVSKENVYS NTFHGATNDS NLVVRDLNKQ ETVTENNSTA SSCSEIDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-112	NAC family protein