PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52660.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 299aa    MW: 34050.4 Da    PI: 7.1402
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.56.4e-54131421128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePw+L++  ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++ ++
  PHT52660.1  13 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWHLKEicRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSN 110
                 69****************************.9***************954555442556**************************************** PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +g++ktLvfy+grap+g+ktdW+mheyrl
  PHT52660.1 111 SKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 142
                 ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MMMSAAANGQ LSVPPGFRFH PTDEELLYYY LRKKVSYEAI DLDVIREVDL NKLEPWHLKE  60
ICRIGSGPQN EWYFFSHKDK KYPTGTRTNR ATTAGFWKAT GRDKAIYLSN SKRIGMRKTL  120
VFYTGRAPHG QKTDWIMHEY RLDDNTAEVE PLQEDGWVVC RVFKKKNYTT SFQHEIGDDH  180
EEKLHFTDQM KAGSAGGLTE PSKQNMQQPQ AACYDYASSF DGSMHLPQLL SPDLSLPCPL  240
PPLYNVNNIE CSPHHNLLRL TSAGPASAFN IPQQHDKFSG DWSFLDKLLA SNQGALQSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.14e-98NAC family protein