PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52438.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 463aa MW: 51062 Da PI: 4.7558

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.5e-34	250	304	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ PHT52438.1 250 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 304 79****************************************************8 PP
2	Myb_DNA-binding	56.3	7.5e-18	252	303	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ PHT52438.1 252 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 303 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MEARPAVSVQ NVVASQLSNC GASGTLSSSL SMFPTALGEK CTKFPDLQQA SMEKELKQHP 60 RTVASSLPSN SGAVGLMFSS SSGFSADLHF SSVSTQEKHS GPTSFISQST YSETSITFPH 120 SGVLQSTASS QYLNENHEPW CIDPLPNFLD YSVDTPVQNS QVACSDKQSD WQEWADLVIN 180 DEDALTSNWN DIMADTSIAD LELKMQYPEE KQPLNFQMQQ VQESEQIPAV HVENLAIAPA 240 SSPASSAATK QRMRWTPELH EAFVEAVNKL GGSERATPKG VLKLMKVEGL TIYHVKSHLQ 300 KYRTARYKPE ASEAGSSEKK QSSLDDLSSL DLKTGIEITE ALRLQMEVQK RLHEQLEIQR 360 NLQLRIEEQG RYLQMMFEKQ CKSMPGVDLA KGSSSMADDA FAQLSDAVQN SPGTNDPGVS 420 KIVTAKEVDE KQKLREREVL EDPETNITSP SDSPPLKRSK LDE

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MEARPAVSVQ NVVASQLSNC GASGTLSSSL SMFPTALGEK CTKFPDLQQA SMEKELKQHP  60
RTVASSLPSN SGAVGLMFSS SSGFSADLHF SSVSTQEKHS GPTSFISQST YSETSITFPH  120
SGVLQSTASS QYLNENHEPW CIDPLPNFLD YSVDTPVQNS QVACSDKQSD WQEWADLVIN  180
DEDALTSNWN DIMADTSIAD LELKMQYPEE KQPLNFQMQQ VQESEQIPAV HVENLAIAPA  240
SSPASSAATK QRMRWTPELH EAFVEAVNKL GGSERATPKG VLKLMKVEGL TIYHVKSHLQ  300
KYRTARYKPE ASEAGSSEKK QSSLDDLSSL DLKTGIEITE ALRLQMEVQK RLHEQLEIQR  360
NLQLRIEEQG RYLQMMFEKQ CKSMPGVDLA KGSSSMADDA FAQLSDAVQN SPGTNDPGVS  420
KIVTAKEVDE KQKLREREVL EDPETNITSP SDSPPLKRSK LDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-92	G2-like family protein