PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT52410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 28504.3 Da PI: 4.8783 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.9 | 1.8e-14 | 1 | 81 | 58 | 128 |
NAM 58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.............kgelvglkktLvfykgrapkgektdWvmheyrl 128 +yfF+ +++k+ +g+r +r+t +g+Wka+ k++ ++ ++ ++g+k++Lv++ ++k++kt+W+m eyr+ PHT52410.1 1 MYFFTLSRRKNDSGTRLERKTPKGVWKASQARKNLSNNekfgdirnkdvtgDDVQIGTKTSLVYW---ESKTTKTSWLMSEYRF 81 5******************************999999777877766666555555**********...566689********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MYFFTLSRRK NDSGTRLERK TPKGVWKASQ ARKNLSNNEK FGDIRNKDVT GDDVQIGTKT 60 SLVYWESKTT KTSWLMSEYR FPDQLHHQPV SNEKXKNNDD DHDKGKKIVE YCNDLIPQPN 120 PINFDHDIAT TPTMQPSFHQ TPTQSYTDAA ATTSTRQQSF PQPLCGVMEN VDNDFLQFDD 180 DISCPIPNID FLDFDPFDQS ISQYFDFDNF PCIKDEDIIS HIPISQDDQT PSSDTKDPQL 240 KMKKIKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-08 | NAC family protein |