PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52250.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 412aa    MW: 45907.3 Da    PI: 4.191
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-181866355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr +k +g+Wv+eIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  PHT52250.1 18 YRGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTPEKAARAFDAALFCLRG 66
                9****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MVKNGKNSSS SSSMSSMYRG VRKRKWGKWV SEIRLPNSRE RIWLGSYDTP EKAARAFDAA  60
LFCLRGSNAN FNFPNSPPEI VDGRLMTPAE IQVAAARFAN RAGPEEEGEE NRAGLRENGM  120
SDRSSSDTED MSLQAESPES EKTEMTSASA QLVNNNNLEN WTGLRESPNF YPSSWSSDVF  180
VRAESPCVES EKTEMTSARL GNNDLENLAG PSENFYPPDM FYRAESSSVS LSNRMGSEKT  240
EMTLAQFANN GLENRAGPME NPYLYPWSSS SNMYLRGESP SVSLSNRVES EKTEMTLDRA  300
GPRENPFLYP SSSSSDMFLR AESPSLSVSN IGESEKTEMT LDNGFMDMFS SLGTVNDMSN  360
FGIFPGFDDL SGEFFVPPEQ QMPNLESSEE QEINYLDYDG FNSQGSSFLW NF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.15e-35ERF family protein