PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51983.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CPP

Protein Properties

Length: 596aa MW: 64630.5 Da PI: 7.5106

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.1	2e-14	126	165	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C++C+N+ e+ PHT51983.1 126 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCNNCHNNVEN 165 89************************.******9875 PP
2	TCR	50.9	3.1e-16	210	249	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PHT51983.1 210 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 249 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MTDENVRMDA CVLDFTVFSQ SPAAAVTSVT EQNQPVVMTS GAQVVPVKLT PVTRPQLQLQ 60 PQQQPQQSQT QPQQQQQQHV LLMPMKGTAA AAPPTTHPSI RPPKPDSPRA RSRQTTSEVK 120 DGTPKKQKQC NCKHSRCLKL YCECFASGIY CDGCNCNNCH NNVENEPARR EAVEATLERN 180 PHAFRPKIAS SPHGARDNKE ETGDGLVLAK HNKGCHCKKS GCLKKYCECF QANILCSENC 240 KCMDCKNFEG SEERQALFHG DHANNMAYLQ QAANAAITGA IGSSGYGSPP VTKKRKAQEL 300 FFGSTLKDPV HRHGQLQQGN HIKSSALPSL SSIPGPCVSN AATVGPSKFT YRSLLADLIQ 360 PQDLKELCSV LVVYSGEAAK MLADEKDASQ KQAEGQTEAS LASSTQERDM HDCCSSGDQG 420 EKIGMEESSL DGADVSKRRP MSPGTLALMC DESDAMFAAA VTSPNDLATL SSNTSSQLPH 480 GQGMTETYGE QERIVLTKFR DCLNRLITLG EIKETKCSSM VRGTDSVDQQ GMTGNVFTTA 540 ETRNQHDSFN NGVSRSSLPQ SRTTTQMFSA VVTTANNTAL SKVHRPDENG DVKPKV

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MTDENVRMDA CVLDFTVFSQ SPAAAVTSVT EQNQPVVMTS GAQVVPVKLT PVTRPQLQLQ  60
PQQQPQQSQT QPQQQQQQHV LLMPMKGTAA AAPPTTHPSI RPPKPDSPRA RSRQTTSEVK  120
DGTPKKQKQC NCKHSRCLKL YCECFASGIY CDGCNCNNCH NNVENEPARR EAVEATLERN  180
PHAFRPKIAS SPHGARDNKE ETGDGLVLAK HNKGCHCKKS GCLKKYCECF QANILCSENC  240
KCMDCKNFEG SEERQALFHG DHANNMAYLQ QAANAAITGA IGSSGYGSPP VTKKRKAQEL  300
FFGSTLKDPV HRHGQLQQGN HIKSSALPSL SSIPGPCVSN AATVGPSKFT YRSLLADLIQ  360
PQDLKELCSV LVVYSGEAAK MLADEKDASQ KQAEGQTEAS LASSTQERDM HDCCSSGDQG  420
EKIGMEESSL DGADVSKRRP MSPGTLALMC DESDAMFAAA VTSPNDLATL SSNTSSQLPH  480
GQGMTETYGE QERIVLTKFR DCLNRLITLG EIKETKCSSM VRGTDSVDQQ GMTGNVFTTA  540
ETRNQHDSFN NGVSRSSLPQ SRTTTQMFSA VVTTANNTAL SKVHRPDENG DVKPKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-179	CPP family protein