PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51819.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 350aa MW: 39561.7 Da PI: 9.3045

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51819.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+v+yL+kkv+g++++l ++i e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk ++s +g++ PHT51819.1 14 LPPGFRFYPTDEELLVQYLCKKVAGHNFPL-QIIGEIDLYKFDPWVLPSKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITS-QGRK 110 79**************************.89***********8777899**********************************9.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkg+kt+W+mheyrl PHT51819.1 111 VGIKKALVFYVGKAPKGSKTNWIMHEYRL 139 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGVQEKDPLL QLSLPPGFRF YPTDEELLVQ YLCKKVAGHN FPLQIIGEID LYKFDPWVLP 60 SKAMFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITSQGRK VGIKKALVFY 120 VGKAPKGSKT NWIMHEYRLF ETSRKNGSSK LDEWVLCRIY KKNSSGPKPL MPGLRSNEYS 180 HAASSTTSSS SQFDDMLESL PEMDDRFSNL PRLSYLKTEK LNLERLDSAN FDWAILAGLK 240 PMPESGPANQ APGVHAQAQA QVNNLIHDSN NMNFLNDVNA PPTNIRGNTK VESINLDEEV 300 ESGIRNQRFD KSGYFQQNMN GLSQLYTNNV NVGQFGIQCP NQTLNLGFRQ

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGVQEKDPLL QLSLPPGFRF YPTDEELLVQ YLCKKVAGHN FPLQIIGEID LYKFDPWVLP  60
SKAMFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITSQGRK VGIKKALVFY  120
VGKAPKGSKT NWIMHEYRLF ETSRKNGSSK LDEWVLCRIY KKNSSGPKPL MPGLRSNEYS  180
HAASSTTSSS SQFDDMLESL PEMDDRFSNL PRLSYLKTEK LNLERLDSAN FDWAILAGLK  240
PMPESGPANQ APGVHAQAQA QVNNLIHDSN NMNFLNDVNA PPTNIRGNTK VESINLDEEV  300
ESGIRNQRFD KSGYFQQNMN GLSQLYTNNV NVGQFGIQCP NQTLNLGFRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-125	NAC family protein