PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51279.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 734aa MW: 83490.3 Da PI: 7.4155

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	91	1.6e-28	46	132	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GF +r+s+ ++s r+++it+r++vCskeg++ + +++ +rr+r ++r+gCka+l +kk+++gkw v+k+++eHnH+l+p PHT51279.1 46 FYNSYARRLGFGTRVSAYRRSLRDNTITTRHLVCSKEGFNPKPDNA---KRRQRIVSRVGCKAHLALKKQTSGKWAVSKFVKEHNHDLVP 132 9**************************************99888...9***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MESEPLNLAN DAMEDNDSSG LDLEQQCELE PYEGMEFESE QAARIFYNSY ARRLGFGTRV 60 SAYRRSLRDN TITTRHLVCS KEGFNPKPDN AKRRQRIVSR VGCKAHLALK KQTSGKWAVS 120 KFVKEHNHDL VPPDQVHLIR SHRHISGPAR SLIDTLQAAG LGATGVMSVL IKQSGGISNV 180 GFTKADCQNY MNQSRQRTLG SGAQYIFDNL KQKQAEDPDF FYAVQGGSSG NIFWADSTSR 240 RNYSYFGDTV TFDTAYRTHR YRVPFAPFIG VNHHCQPVLF GCALLLNESE SSFIWLFQNW 300 LAAMSGRHPV SITTDHDRII RSAIVDVFPG ARHRFCKSNI FREAQERLSH SLQSFPTFEA 360 EFQKCVNLTE TIEEYELCWG SLLGRYNVID DEWLQSMYDA RQQWVPVYLQ DTFFGETSIA 420 KTSDNTNSYF DGFIDASTNI HVLMSQYEKA TANRHEKEVK AEYDTINIAP ILKTPSPMEK 480 QAANIYTREI FLMFQQELME TLAYPATVIK DTGSDVIYQV AKFGEDHKVN YVQYNVFEKK 540 ASCSCQLFDF SGILCRHILA VFRVKNVLRL PSHYVLKRWT RKAKSDVVLD EDKLGSPSSH 600 NNSFTDRFEK LNLEATKYVK EGVDSKNVYL VAMDALREAS KKVAAAVYGT PALPLNQDMN 660 KAKDFNLNGN QTGCDDSSLL SQDERIQELT AAVVNASEIC EAYRTKLLSI LRELEEQKLR 720 ISLKVQNMRL NRIA

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MESEPLNLAN DAMEDNDSSG LDLEQQCELE PYEGMEFESE QAARIFYNSY ARRLGFGTRV  60
SAYRRSLRDN TITTRHLVCS KEGFNPKPDN AKRRQRIVSR VGCKAHLALK KQTSGKWAVS  120
KFVKEHNHDL VPPDQVHLIR SHRHISGPAR SLIDTLQAAG LGATGVMSVL IKQSGGISNV  180
GFTKADCQNY MNQSRQRTLG SGAQYIFDNL KQKQAEDPDF FYAVQGGSSG NIFWADSTSR  240
RNYSYFGDTV TFDTAYRTHR YRVPFAPFIG VNHHCQPVLF GCALLLNESE SSFIWLFQNW  300
LAAMSGRHPV SITTDHDRII RSAIVDVFPG ARHRFCKSNI FREAQERLSH SLQSFPTFEA  360
EFQKCVNLTE TIEEYELCWG SLLGRYNVID DEWLQSMYDA RQQWVPVYLQ DTFFGETSIA  420
KTSDNTNSYF DGFIDASTNI HVLMSQYEKA TANRHEKEVK AEYDTINIAP ILKTPSPMEK  480
QAANIYTREI FLMFQQELME TLAYPATVIK DTGSDVIYQV AKFGEDHKVN YVQYNVFEKK  540
ASCSCQLFDF SGILCRHILA VFRVKNVLRL PSHYVLKRWT RKAKSDVVLD EDKLGSPSSH  600
NNSFTDRFEK LNLEATKYVK EGVDSKNVYL VAMDALREAS KKVAAAVYGT PALPLNQDMN  660
KAKDFNLNGN QTGCDDSSLL SQDERIQELT AAVVNASEIC EAYRTKLLSI LRELEEQKLR  720
ISLKVQNMRL NRIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein