PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51221.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 661aa MW: 72133.5 Da PI: 5.8264

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.2	8.8e-18	436	486	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr++ +g+WvAeIr+p + r +r +lg+f+ ++Aa a++aa++kl+g PHT51221.1 436 CKYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDNSYDAAVAYDAAALKLYG 486 79***999.******8...3.35***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MPPSPASDAY IREPHKYFDE VVIMVRAGDG GHGAVLSMPN HKAPSKSQGK FDRNKTKKKA 60 SYKRDSNGSI VLPMGGHGGD VVIYADESKD SLLEFHNKSK HKAKRGGNVD SMGVLTSYLQ 120 NGVAAPTLRI PVPLGTVVKL KKGKFLADLA NPGDEVLVAR GGQGGISLLE VPEHKRKQMT 180 TLTANIMRDD TDKVLSFGQP GEEVSLQLIL RVVADVGLVG LPNAGKSTLL AAITHAKPDI 240 ADYPFTTLMP NLGRLDGDPS LGADKYSSEA TLADLPGLIE GAHLGKGLGR NFLRHLRRTR 300 LLVHVVDAAA EDPVSDYRTV KEELRMYNPE YLDRPYLVVL NKIDKPEAIY RLPTLTEEIW 360 RIGCERISSE PGRNSELSNT LSAKDQKVKE LEEYPRPLAV VGVSVLPKKQ TQAKLTQATS 420 RKGCMRGKGG PENASCKYKG VRQRTWGKWV AEIREPNRGA RLWLGTFDNS YDAAVAYDAA 480 ALKLYGAEAK LNLPHLYNNP AQAQEEINSN SGPITINPAP APAPVVYNVA SPSTWSVGND 540 PSLYFDNDYD INSFATSDDP ISIDFMGLMD TTDHEEFAEK NNNQISQGLG GEMWTDEKVN 600 NQISQGLGGE MWTDLNMLPE IDDSSIWEEA EATTSFQEAV INDPGINGCN LDGGINFPPW 660 C

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MPPSPASDAY IREPHKYFDE VVIMVRAGDG GHGAVLSMPN HKAPSKSQGK FDRNKTKKKA  60
SYKRDSNGSI VLPMGGHGGD VVIYADESKD SLLEFHNKSK HKAKRGGNVD SMGVLTSYLQ  120
NGVAAPTLRI PVPLGTVVKL KKGKFLADLA NPGDEVLVAR GGQGGISLLE VPEHKRKQMT  180
TLTANIMRDD TDKVLSFGQP GEEVSLQLIL RVVADVGLVG LPNAGKSTLL AAITHAKPDI  240
ADYPFTTLMP NLGRLDGDPS LGADKYSSEA TLADLPGLIE GAHLGKGLGR NFLRHLRRTR  300
LLVHVVDAAA EDPVSDYRTV KEELRMYNPE YLDRPYLVVL NKIDKPEAIY RLPTLTEEIW  360
RIGCERISSE PGRNSELSNT LSAKDQKVKE LEEYPRPLAV VGVSVLPKKQ TQAKLTQATS  420
RKGCMRGKGG PENASCKYKG VRQRTWGKWV AEIREPNRGA RLWLGTFDNS YDAAVAYDAA  480
ALKLYGAEAK LNLPHLYNNP AQAQEEINSN SGPITINPAP APAPVVYNVA SPSTWSVGND  540
PSLYFDNDYD INSFATSDDP ISIDFMGLMD TTDHEEFAEK NNNQISQGLG GEMWTDEKVN  600
NQISQGLGGE MWTDLNMLPE IDDSSIWEEA EATTSFQEAV INDPGINGCN LDGGINFPPW  660
C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75490.1	3e-36	ERF family protein