PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50803.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 363aa    MW: 40281.9 Da    PI: 4.3947
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.28.3e-053123511054
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r R d+i++ ++ L+e++P      ++K s + +L +A++Y++sL
  PHT50803.1 312 RLRKDKIRETISILQEIIPRG----KGKDS-MVVLDEAIHYLRSL 351
                 7799****************7....68888.99**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MDKDFVSSFH HQYSDLQLAH LNFSYPQFDI GQQNSFPTYM IPQSNEVPTN GNSPFFTFSG  60
LPESNASWPT EPCNWLYYSP QFYQGFNPVS TTLPKEKLAP RAPENLGGYK HPNGGTASAQ  120
KRFLVFDQSG DQTTLIYNSP NGTPVQCPAS LNPRAPALYN SSKEDPEIKT NEASPFGHFF  180
DKEYYEDNNK DDVESEMHED TEELNALLYS DDDNDCSEDD EETSTGHSPS TMTAHDLPEL  240
SDERGEEVAS SVGSTKRHKL LDGSYDAPEI RDTATSTKAY TCSDLEDDAQ SSCANGLEQD  300
SGAPGSPSGK KRLRKDKIRE TISILQEIIP RGKGKDSMVV LDEAIHYLRS LKVKARSLGL  360
DSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.17e-08bHLH family protein