PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT50721.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 381aa MW: 42346.8 Da PI: 6.255

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT50721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	115.8	2.5e-36	159	254	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 lfqrlwse+De+++L+G+ d+++k++++p++d+ af+e +kks++++vsk ql +KirrLKkK+ ++ k ++gke +++k+h+qk++elskkiWg+ PHT50721.1 159 LFQRLWSEDDEVAILKGMSDYRSKKKADPVADLGAFHESIKKSLHVDVSKAQLQDKIRRLKKKYMNNAGK-EKGKERVLTKAHEQKVYELSKKIWGK 254 79******************************************************************.9*********************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MANNHSDEEE ESGEEMEVSS PGSESEYESE PEPEPQKKPP VAAAKKPPPP QDSSSSEEEE 60 SESESEPDPD PVTQKPNLLV KPIASKPMDV PKKSSPKPRS KSDASAKLVS PKKSSSTVGA 120 KRAAGECEAK ESKKSKKKQE KEVETPVKKP VNEDVKRQLF QRLWSEDDEV AILKGMSDYR 180 SKKKADPVAD LGAFHESIKK SLHVDVSKAQ LQDKIRRLKK KYMNNAGKEK GKERVLTKAH 240 EQKVYELSKK IWGKEKSDKG DQVEVVKVDN VAASKGRQDG GVKDNGVLFE VKEEKPSAEV 300 EKDVEVKRNL NLIPCVENVA GLEKWLEENS GVLSVEKRNA MKEKWEALKA AEADLCLRRV 360 KLIAEQMELV LEAVRDSGTE T

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MANNHSDEEE ESGEEMEVSS PGSESEYESE PEPEPQKKPP VAAAKKPPPP QDSSSSEEEE  60
SESESEPDPD PVTQKPNLLV KPIASKPMDV PKKSSPKPRS KSDASAKLVS PKKSSSTVGA  120
KRAAGECEAK ESKKSKKKQE KEVETPVKKP VNEDVKRQLF QRLWSEDDEV AILKGMSDYR  180
SKKKADPVAD LGAFHESIKK SLHVDVSKAQ LQDKIRRLKK KYMNNAGKEK GKERVLTKAH  240
EQKVYELSKK IWGKEKSDKG DQVEVVKVDN VAASKGRQDG GVKDNGVLFE VKEEKPSAEV  300
EKDVEVKRNL NLIPCVENVA GLEKWLEENS GVLSVEKRNA MKEKWEALKA AEADLCLRRV  360
KLIAEQMELV LEAVRDSGTE T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-26	GeBP family protein