PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT50285.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 290aa MW: 33316.9 Da PI: 8.104 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.1 | 1.2e-51 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lp+GfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++PwdLp + +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + + PHT50285.1 8 LPAGFRFHPTDEELVTHYLCRKCASQPIAV-PIIAEIDLYKYNPWDLPDLALYGEKEWYFFSPRDRKYPNGSRPNRAAGNGYWKATGADKAIGR--PKP 103 799*************************99.88***************65556799************************************98..789 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kk Lvfy g+apkgekt+W+mheyrl PHT50285.1 104 MGIKKALVFYAGKAPKGEKTNWIMHEYRL 132 ***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGAVELRLPA GFRFHPTDEE LVTHYLCRKC ASQPIAVPII AEIDLYKYNP WDLPDLALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGNGYWK ATGADKAIGR PKPMGIKKAL VFYAGKAPKG 120 EKTNWIMHEY RLAHVDRSAR NKNNSLRLDD WVLCRIYNKK STIEKSQLNS RKMNVAMSPV 180 DIKPKIMAFP VSTRPSVTSQ QVNNDFIYFD SSDSLPKLHT DSSCSEHVLS PEFTCEREVQ 240 SEPKVSEWEK NALDFPFNYS DDATTTMGEL ESCYEMSPLQ DIFMYLQKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-136 | NAC family protein |