PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50173.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 306aa    MW: 34451 Da    PI: 5.4398
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.81.3e-153886254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r +h+e E+rRR +iN++f++Lr l+P++    ++K + a+ L +++eYI+ L
  PHT50173.1 38 RSKHSETEQRRRIKINERFQTLRNLIPEN----DQKRDRASFLLEVTEYIQFL 86
                899*************************9....9*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MVRTVKTRHE ADEEDDEESS QKGKLEGKRN AGKVNSHRSK HSETEQRRRI KINERFQTLR  60
NLIPENDQKR DRASFLLEVT EYIQFLHEKL QLYEGTYQGW SAEPSKLMPW RSTSGPVEDF  120
VEHSQMIRNG SAHEDNVVIN PTLLASAQSS VEPNLTATAL YRATDNSRMA ADEAIAFNMP  180
LQPNLFENAS VQPSPDAEHC TSQPQSLYWP GKQDTIESDV LSYGRNDQEQ MKINGEEAGI  240
SSAYSQRLID TVHQTLESIG LDISQANVRV ELDIGKRSSS GVTATTISIG ENHDHAPKRR  300
KTEGSM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1297303PKRRKTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-51bHLH family protein