PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT50153.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 530aa MW: 59545.2 Da PI: 5.4449

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT50153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	130.9	4.8e-41	15	96	35	116
CG-1 35 ksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116 + gs++L+n++++ryfrkDG+sw+k+kdgktv E+he+LKvg+ e+l+cyY h+e+n +fq r+yw+L+ ++e+ivlvhy++ PHT50153.1 15 PGGSMFLFNKRVLRYFRKDGHSWRKRKDGKTVGEAHEHLKVGNSEALNCYYEHGEKNFNFQGRSYWMLDPAYEHIVLVHYRD 96 579*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MLCYTAILQK WLLSPGGSMF LFNKRVLRYF RKDGHSWRKR KDGKTVGEAH EHLKVGNSEA 60 LNCYYEHGEK NFNFQGRSYW MLDPAYEHIV LVHYRDITEG MQIAAFMSQS SPISSTFSLS 120 PSLYSTQHPG FTVVGSESYQ QYQNESCPGY REICSDALIN SNGMKISDIT RRTEGVSSSP 180 RVEISQALQR LEEQLSLNDD SSAETYPLYS EIKNSNDAEN LIHDKSSVVQ FQDNSNNLLL 240 LPHSGESSES QHQLLNLDAN MWKEMLDHCR SSPAALSQAK RFEKLDENIG ISSEADMSLT 300 IVQKQKFTIH DISPDWGYAS EETKIVIVGS YLCSPSEYTW TCMFGDIEVP VQIIKEGAIR 360 CQAPPHLPGK VTLCVTTGNG VSCSEMLLSD SSMQKGYGSE STTDILENSK AKEDSWSQVI 420 ESLLFGTPTS IITVDWLLQE LLKNKLQQWL SSKLQVKDNE MSYSLSRKEQ GITHMIAGLG 480 FEWALHPILN AGVSANFRDI SDWTALHWAA RFGSAVATVI PLQCQMLILF

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MLCYTAILQK WLLSPGGSMF LFNKRVLRYF RKDGHSWRKR KDGKTVGEAH EHLKVGNSEA  60
LNCYYEHGEK NFNFQGRSYW MLDPAYEHIV LVHYRDITEG MQIAAFMSQS SPISSTFSLS  120
PSLYSTQHPG FTVVGSESYQ QYQNESCPGY REICSDALIN SNGMKISDIT RRTEGVSSSP  180
RVEISQALQR LEEQLSLNDD SSAETYPLYS EIKNSNDAEN LIHDKSSVVQ FQDNSNNLLL  240
LPHSGESSES QHQLLNLDAN MWKEMLDHCR SSPAALSQAK RFEKLDENIG ISSEADMSLT  300
IVQKQKFTIH DISPDWGYAS EETKIVIVGS YLCSPSEYTW TCMFGDIEVP VQIIKEGAIR  360
CQAPPHLPGK VTLCVTTGNG VSCSEMLLSD SSMQKGYGSE STTDILENSK AKEDSWSQVI  420
ESLLFGTPTS IITVDWLLQE LLKNKLQQWL SSKLQVKDNE MSYSLSRKEQ GITHMIAGLG  480
FEWALHPILN AGVSANFRDI SDWTALHWAA RFGSAVATVI PLQCQMLILF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	8e-66	CAMTA family protein