PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49766.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 263aa    MW: 29270.8 Da    PI: 8.5827
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.41.9e-18188222135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  PHT49766.1 188 CSHCGVQKTPQWRTGPMGAKTLCNACGVRFKSGRL 222
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDNQSSVDEF FVDDFLDLSN GFGEDEIEKL EEQPNGIHSQ KTCSSSPQKL LEKMEAAENE  60
DFGSFPGSEL NFQEIGLDSL EWLSQFVEDN SCVGYSLIGK LPETENSIQI KPCFTTPVQT  120
KARTKRARTG GRVWSLRSVT LTGSSTSSGS SSFSSTTTTT TAESINRLSP PFKQRKTRVE  180
KSVQPRRCSH CGVQKTPQWR TGPMGAKTLC NACGVRFKSG RLLPEYRPAC SPTFSSERHS  240
NNHRKVLEMR QKKAGLALPV QRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-56GATA family protein