PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT49765.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SRS

Protein Properties

Length: 322aa MW: 35764.3 Da PI: 6.8274

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT49765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	111.2	1.6e-34	107	171	2	66
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaas 66 +sg++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpaakrrerqq ++ ++++++ PHT49765.1 107 NSGAISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQLASLNQQEENKF 171 57899**********************************************87766555544433 PP
2	DUF702	73.7	5.6e-23	184	237	101	154
DUF702 101 etsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++++P++v+s+avf++vr+ss+++ e+++aYq++v+i+Gh+fkGiLydqG ++ PHT49765.1 184 VANNFPSKVNSTAVFQRVRMSSIEETEDQIAYQAVVDINGHIFKGILYDQGDDH 237 3456***********************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MAGFFSLGGG VGREETSSQE NYRHHQENTS THNWYLYKNH YQELPTSKGF ELWQQQQQSH 60 HDEQNYQLLR NSIINPFGLD IGPSHDHHEG LNNSRSMSNF MMMRSSNSGA ISCQDCGNQA 120 KKDCQHMRCR TCCKSRGFQC QTHVKSTWVP AAKRRERQQL ASLNQQEENK FKRQKDDPIT 180 GLEVANNFPS KVNSTAVFQR VRMSSIEETE DQIAYQAVVD INGHIFKGIL YDQGDDHEYN 240 YMNNVGGGDS SSGGDPVPHQ HNLIGVAGTA TSVANNATAG SGGDAPVAVT AGGSHFLETS 300 LYSAPLINTF MAGTQFFPPP RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	6e-63	SRS family protein