PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49540.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 131aa    MW: 15067.5 Da    PI: 6.7964
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20557256
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +g+++AeIrd  +++   +r++lg+f tae+Aa+a+++a+ +++g+
  PHT49540.1  5 KYRGVRKRP-WGKYAAEIRDtNRQG--GTRVWLGTFNTAEDAARAYDRAAYNMRGN 57
                8********.**********33333..4*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MDEVKYRGVR KRPWGKYAAE IRDTNRQGGT RVWLGTFNTA EDAARAYDRA AYNMRGNLAI  60
LNFPEEYNLP RTSSHFYDNS STMATSSSSS SNVHARNDDQ QRTGQVLELE YLDDKLLEDL  120
LDCDQHANKR K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.17e-25ERF family protein