PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT49349.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 350aa MW: 41051.5 Da PI: 9.6635

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT49349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.4	1.1e-30	84	137	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+++LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ PHT49349.1 84 PRLRWTPQLHLSFVNAIHRLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 137 8****************************************************7 PP
2	Myb_DNA-binding	47.9	3.1e-15	85	136	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+a+++lGg t+k++ ++m+ g++ ++ks++q+y+ PHT49349.1 85 RLRWTPQLHLSFVNAIHRLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 136 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEHGNGETSE EYYMEKVMSS IDLNEEVDHD HSKIQQIDDE AIEVISVESD KITNEENNSS 60 SCGNEINIKN KMSKVRQYVR SKLPRLRWTP QLHLSFVNAI HRLGGQERAT PKLVLQMMNV 120 RGLSIAHVKS HLQMYRSKKL GEFGQVLGHG HRANQRRNYL YGNLSQRSFN PLQDFKMKNG 180 AIVLARNFND DDNINHHFQN SFARTQSRYM EWSSHQGTNN LLKMKILENH QICPIRQKHY 240 FLEEKKWPSF EFNKNKLNSQ SLFHHTGPKW SCRYNNLDPK YKTPLRFEMK QDKKFILEKD 300 YWLPDLQLGL SRSVENNMKE KIIHHSNKVE LSDINTMLSL SLPSYSSSAT

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEHGNGETSE EYYMEKVMSS IDLNEEVDHD HSKIQQIDDE AIEVISVESD KITNEENNSS  60
SCGNEINIKN KMSKVRQYVR SKLPRLRWTP QLHLSFVNAI HRLGGQERAT PKLVLQMMNV  120
RGLSIAHVKS HLQMYRSKKL GEFGQVLGHG HRANQRRNYL YGNLSQRSFN PLQDFKMKNG  180
AIVLARNFND DDNINHHFQN SFARTQSRYM EWSSHQGTNN LLKMKILENH QICPIRQKHY  240
FLEEKKWPSF EFNKNKLNSQ SLFHHTGPKW SCRYNNLDPK YKTPLRFEMK QDKKFILEKD  300
YWLPDLQLGL SRSVENNMKE KIIHHSNKVE LSDINTMLSL SLPSYSSSAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	9e-37	G2-like family protein