PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT49100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 201aa MW: 21661.7 Da PI: 10.633 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58 | 1.3e-18 | 36 | 70 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++ PHT49100.1 36 CVDCGTSKTPLWRGGPAGPKSLCNACGIKSRKKRR 70 ********************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 201 aa Download sequence |
MVDPSDKGLV SDEMSSETTS PVKSSPETSQ SNVKTCVDCG TSKTPLWRGG PAGPKSLCNA 60 CGIKSRKKRR ALLGLDKEDK KSKKSVSSGH KSVGLQHQSN QTSDGSSSSE DSGSNNFVKN 120 IVSSSLKKKL LPFGREVVLQ KPRSRSTQKR KLGEVEQAAF LLMALSCGSF YNQRRTKMEK 180 ARRNDKCCGT LGSKTSTLLV G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G06740.1 | 6e-34 | GATA family protein |