PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT48969.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 396aa MW: 44666.4 Da PI: 5.2557

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT48969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.5	7.8e-51	18	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv++yL++kv gk++++ ++++e+d+yk+eP +L + ++k+++ ewyfFs+ dkky +g+r nrat +gyWkatgkd+ v + k+ PHT48969.1 18 LAPGFRFHPTDEELVMYYLRRKVCGKPFRF-QAVTEIDVYKFEPGELAEhsSLKTRDLEWYFFSPVDKKYCNGSRLNRATGQGYWKATGKDRYVRH-KS 114 579***********************99.88**********84246777888*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLvf++grap+g++t+Wvmheyrl PHT48969.1 115 QAIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 145 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MEQEGSMVAT PTPAPTSLAP GFRFHPTDEE LVMYYLRRKV CGKPFRFQAV TEIDVYKFEP 60 GELAEHSSLK TRDLEWYFFS PVDKKYCNGS RLNRATGQGY WKATGKDRYV RHKSQAIGMK 120 KTLVFHSGRA PDGKRTNWVM HEYRLADEEL EKAGVVQDCF VLCRIFQKSA LGPPTGDRYA 180 PFIEEEWDDD SAVLPGGDMV DDVVNGVEAR VESNDLDQDA LPKTARHSEN LTEPRGLPFV 240 CKRERSEEPE LLSLSQSKRS QHDVPSSSRA NGSEDSTFTS QDPVNKTTTD PVNMMTTKDC 300 PLALLGFPLL EPFEPKESQP CNPLTFDSSN LDKSVPPGYL KFISNLENGI LNVSMERETL 360 KIEVMRAQAM INVLQSRIDL LTKENEDMRR LVRGGG

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MEQEGSMVAT PTPAPTSLAP GFRFHPTDEE LVMYYLRRKV CGKPFRFQAV TEIDVYKFEP  60
GELAEHSSLK TRDLEWYFFS PVDKKYCNGS RLNRATGQGY WKATGKDRYV RHKSQAIGMK  120
KTLVFHSGRA PDGKRTNWVM HEYRLADEEL EKAGVVQDCF VLCRIFQKSA LGPPTGDRYA  180
PFIEEEWDDD SAVLPGGDMV DDVVNGVEAR VESNDLDQDA LPKTARHSEN LTEPRGLPFV  240
CKRERSEEPE LLSLSQSKRS QHDVPSSSRA NGSEDSTFTS QDPVNKTTTD PVNMMTTKDC  300
PLALLGFPLL EPFEPKESQP CNPLTFDSSN LDKSVPPGYL KFISNLENGI LNVSMERETL  360
KIEVMRAQAM INVLQSRIDL LTKENEDMRR LVRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.1	4e-89	NAC family protein