PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT48923.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 448aa MW: 49104.6 Da PI: 6.07

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT48923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.7	2.6e-33	230	284	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fvea+++LGGsekAtPk +l++m+v+gLt++hvkSHLQkYR+ PHT48923.1 230 KPRMRWTPELHEVFVEAISKLGGSEKATPKGVLKIMNVEGLTIYHVKSHLQKYRT 284 79****************************************************8 PP
2	Myb_DNA-binding	52	1.6e-16	232	283	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+a+ +lGg t+k + + m+ +g+t +++ks++qky+ PHT48923.1 232 RMRWTPELHEVFVEAISKLGGSekaTPKGVLKIMNvEGLTIYHVKSHLQKYR 283 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MNMRRALCIQ RSSEAQNGNM GVSGAMSTSS NLIPSQAIPS ASKSRTVGHQ LSSTSGPHKD 60 FNFSSTSSQE SRQRKYPFIS SEASAATCRS SLSSIHSTSL DNYPIGNDSN SSGKDACHDF 120 INFPANDLVQ NDQVESLAVV MPSDDQAKRF NWQEWADQLI NDDDDGLGSS WSDILVDINP 180 PEIKFLETSE VLACESHILP PPPSPAAAAA ASSGKICPVG SPSSTTALAK PRMRWTPELH 240 EVFVEAISKL GGSEKATPKG VLKIMNVEGL TIYHVKSHLQ KYRTARYKPE PSEGTPEKKP 300 TSVIEMPSLD LKTTMGITEA LRLQMEVQKQ LHEQLEIQRK LQLRIEEQGK YLEMMFERTK 360 DIGKDFKVSS SITDEHPSPS TETKHSPPND KSEAFEKDPV SLNDRSSSGG KSPDKKARED 420 HDTDGTDSCC SPPSKRARTE ERSAVHES

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MNMRRALCIQ RSSEAQNGNM GVSGAMSTSS NLIPSQAIPS ASKSRTVGHQ LSSTSGPHKD  60
FNFSSTSSQE SRQRKYPFIS SEASAATCRS SLSSIHSTSL DNYPIGNDSN SSGKDACHDF  120
INFPANDLVQ NDQVESLAVV MPSDDQAKRF NWQEWADQLI NDDDDGLGSS WSDILVDINP  180
PEIKFLETSE VLACESHILP PPPSPAAAAA ASSGKICPVG SPSSTTALAK PRMRWTPELH  240
EVFVEAISKL GGSEKATPKG VLKIMNVEGL TIYHVKSHLQ KYRTARYKPE PSEGTPEKKP  300
TSVIEMPSLD LKTTMGITEA LRLQMEVQKQ LHEQLEIQRK LQLRIEEQGK YLEMMFERTK  360
DIGKDFKVSS SITDEHPSPS TETKHSPPND KSEAFEKDPV SLNDRSSSGG KSPDKKARED  420
HDTDGTDSCC SPPSKRARTE ERSAVHES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	2e-80	G2-like family protein