PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT48091.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 454aa MW: 50542.2 Da PI: 7.0357

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT48091.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.6	2.1e-35	48	191	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........tksgy 82 lp+G++F+Ptd+el+ e+L++kv +k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ + + PHT48091.1 48 LPAGVKFDPTDQELI-EHLEAKVVAKEskshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecqdlqGGETR 144 799**********.99999885665443333333666646******.555666799**************756555554433778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+++v++ +g++ g+kk+Lv+y g+++k+ekt+Wvmh+y+l PHT48091.1 145 WHKTGKTRPVMV-NGKQRGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 191 ********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MNKSSHQLGS ISSSDLIDAK LEEHQLCGSK QCPGCGHKLE GKPDWVGLPA GVKFDPTDQE 60 LIEHLEAKVV AKESKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA 120 YTTGTRKRRK IQTECQDLQG GETRWHKTGK TRPVMVNGKQ RGCKKILVLY TNFGKNRKPE 180 KTNWVMHQYH LGQHEEEKEG ELVVSKIFYQ TQPRQCNWSN TTGSAGGGGE ANSDVNSRRD 240 SGSRSCSSSK DINNNFPSSN RDELSAAVCA AMSNYTTMDI QQFKPEHFSF LPFRKTFDHE 300 AGIVVGEGSI AREGGPVAAA PDERDMGEPQ NPHDPKLHQH QHQHHLVSTS AFHISRPTPP 360 ISAIITPSPL HNTSVILGED AFHVPRSIIL PNDNFQQQQH HKLGGRSASE LEQLIMGCTS 420 TDIKGESSIT NSQDADWLKY SHFWPDPDNP DHHG

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MNKSSHQLGS ISSSDLIDAK LEEHQLCGSK QCPGCGHKLE GKPDWVGLPA GVKFDPTDQE  60
LIEHLEAKVV AKESKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA  120
YTTGTRKRRK IQTECQDLQG GETRWHKTGK TRPVMVNGKQ RGCKKILVLY TNFGKNRKPE  180
KTNWVMHQYH LGQHEEEKEG ELVVSKIFYQ TQPRQCNWSN TTGSAGGGGE ANSDVNSRRD  240
SGSRSCSSSK DINNNFPSSN RDELSAAVCA AMSNYTTMDI QQFKPEHFSF LPFRKTFDHE  300
AGIVVGEGSI AREGGPVAAA PDERDMGEPQ NPHDPKLHQH QHQHHLVSTS AFHISRPTPP  360
ISAIITPSPL HNTSVILGED AFHVPRSIIL PNDNFQQQQH HKLGGRSASE LEQLIMGCTS  420
TDIKGESSIT NSQDADWLKY SHFWPDPDNP DHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-170	NAC family protein