PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT47796.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 281aa MW: 30677.3 Da PI: 9.8777 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45 | 2.5e-14 | 100 | 144 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky PHT47796.1 100 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 144 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MTITYGHSSF ISAGEFPPAD VSGGEIMLFG VRVKVDPMRK SVSLNNLSQY EQPNSNDNNN 60 SNGGNTNDSS SKVADEGYAS ADDAVPHHSG SGRERKRGVP WTEEEHKLFL LGLQKVGKGD 120 WRGISRNFVK TRTPTQVASH AQKYFLRRTN LNRRRRRSSL FDITTDSVSV LPTVEAKNLQ 180 EAHVETSKIN AFQVTSVPVK FAPLVLPAQM DKPIESPIQS YNASSIYLRP VPVVVPVSNQ 240 SSAIESSSLS LTLSLSSPSS SSTRYQVMSN FSNGESIISV A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74840.2 | 5e-55 | MYB_related family protein |