PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT47729.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 502aa MW: 54267.3 Da PI: 5.9355

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT47729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.6e-39	155	215	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PHT47729.1 155 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKNSA 215 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MREVKDGEIK LFGKKIALPE NGKMLPVIVS GEDSDVGKSV SGSEVVTGEE SSTGSDRGDP 60 CLVDKEGNTS SESDGGSEYE KEDADKDQMT RELSEANLEE KYQSQIMEES ENPKSPSENK 120 SKTTTDDDPP TAKSSRTEGD QNDAANSQQK PLKKPDKILP CPRCNSMDTK FCYYNNYNIN 180 QPRHFCKSCQ RYWTAGGTMR NVPVGAGRRK NKNSASHCRH IMISEALEAA RMDSPNGFHH 240 PAFKPNGTVL SFGPDSPLCD SMASVLNLAE NKTPNGIRNG FYRPEHKNPS GLGGENGDDC 300 SSGSSVTTSN SMAEGVKNRP PEAVMQTINA FPSPVPCIPG VPWPFPFAAV PFPAVSPSGY 360 PMPFCPPPPY WNCSVPGPWS LPWLTPPSPT ANQNGSGSAP NSPLGKHSRD GELLKPNNPE 420 VQKNSEGFVI VPKTLRIDDP DEAAKSSIWS TLGIKYDSVS RGGLFKALQP KSSEKDHPGT 480 AFPALQANPA AFSRSLSFQE RV

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MREVKDGEIK LFGKKIALPE NGKMLPVIVS GEDSDVGKSV SGSEVVTGEE SSTGSDRGDP  60
CLVDKEGNTS SESDGGSEYE KEDADKDQMT RELSEANLEE KYQSQIMEES ENPKSPSENK  120
SKTTTDDDPP TAKSSRTEGD QNDAANSQQK PLKKPDKILP CPRCNSMDTK FCYYNNYNIN  180
QPRHFCKSCQ RYWTAGGTMR NVPVGAGRRK NKNSASHCRH IMISEALEAA RMDSPNGFHH  240
PAFKPNGTVL SFGPDSPLCD SMASVLNLAE NKTPNGIRNG FYRPEHKNPS GLGGENGDDC  300
SSGSSVTTSN SMAEGVKNRP PEAVMQTINA FPSPVPCIPG VPWPFPFAAV PFPAVSPSGY  360
PMPFCPPPPY WNCSVPGPWS LPWLTPPSPT ANQNGSGSAP NSPLGKHSRD GELLKPNNPE  420
VQKNSEGFVI VPKTLRIDDP DEAAKSSIWS TLGIKYDSVS RGGLFKALQP KSSEKDHPGT  480
AFPALQANPA AFSRSLSFQE RV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-55	Dof family protein