PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47596.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 242aa    MW: 26488.2 Da    PI: 9.1182
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000196890123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C + F ++  L  H++ H
  PHT47596.1 68 FSCNYCQRKFYSSQALGGHQNAH 90
                89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MEVQASEQIS NNNKTTQDDQ ENDDLFLDLS LDHGPKSNII PTSSSDASRS ASNNNNNNKN  60
NESEPRIFSC NYCQRKFYSS QALGGHQNAH KRERTIAKRG QKISSSAAFG YDKYSSMASL  120
PLHGSFNRSL GIQVHSMIHK PTISTTFGAP TLYGHPGWSI RRPIDQQPAV GRLGTESNNC  180
HVAGTSSGGG AARFDNIIQK FPVVQVDGIS PYRWDSGGGP PHITKSSNNQ DELKKLDLSL  240
RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.15e-42C2H2 family protein