PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47353.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 284aa    MW: 32022.7 Da    PI: 6.6527
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-1981130255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a++ ++g
  PHT47353.1  81 KYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALTFKG 130
                 8********.**********94....45**********************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MERRSKEDNH NSSNNFPVYS SARSHQDMSA MVSVLSQVIG NTSSASADSS IDVNPLTLIP  60
QLQNHSQSSI QDNQGSSGRR KYRGVRQRPW GKWAAEIRDP KKAARVWLGT FETAEAAALA  120
YDEAALTFKG NKAKLNFPER VQGKFQFLTD TTTTQNHNII VPHQQVQFPA ATSSNNHLSP  180
YNFQSYYPDV HQYAELLRSD HNTTDLNFDA SRSFNQYTSS SSGLSFDTSQ SSVSNIHEEQ  240
YHNYQQEEEE GGNFMKFTTS RYGNSSSTCG PKHESNWEEF EHGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-38ERF family protein