PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT47294.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 1009aa MW: 112583 Da PI: 7.7284

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT47294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.4	8.1e-09	489	537	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT +E +lv++v+++G g+W+ I r Rt ++k++w+++l PHT47294.1 489 PWTIDEVVKLVEGVARYGAGRWSEIKRLAFascSYRTSVDLKDKWRNLL 537 8**************************999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1009 aa Download sequence
MDAIEAKTEV SVVPVTNTFG ALEKEITDPI VYQLVRVDGD GRLVPATQDE IMVVEDLLED 60 DKCEPKLVPD TRQISESCIT EGYLMARNLF QVPEEKSNVL VDAVPDLGNI DAPEKVAVHG 120 LNPFSELSDF DQSVRTETCF HSQDASNEDM PSTSAAGSSW KPDFSKLEGK ICLDNLTVKE 180 LQETFKATFG RETSVKDKQW LKRRITMGLT NSCDFSCTTF IIRDNVVVKN GEEQIYHRVK 240 SRISADSEDG VANSDSRGSL GDRDNRINDD ADLCGEDVST SAFESCNVTK NLDTEQRTAK 300 RARKPTKRYI EELSELESRE SSEKLASPDK ISRYRFACPQ THMRPTKNVR SNARPLVTRE 360 DSLGGSGIQI PFVSRIRRSR PRENFMPLLK LQPCGMDMVT RKVTSAFDVS GPQEDDKRNN 420 DLIKSSSSPG WTQQPLIAAC EKDDHYRGMK IVELENDVEP NDCSEYNSDD NVVTVPTQKG 480 GMRRKHHRPW TIDEVVKLVE GVARYGAGRW SEIKRLAFAS CSYRTSVDLK DKWRNLLKAS 540 FVQLPAEKGI LNSRKQASVP IPAAILRRVR ELADMQGQFP PGLSTGKSSG HSSSDRSVHD 600 ARSGFLFPTQ STGGEAESSV RSPEPRLSCR RITKYHLGQL KAKIAKLRTQ LLEPAKGSSG 660 AGEGFEVTKF GHGRVALIGF PSVGKSTLLT MLTGTHSEAA SYEFTTLTCI PGIIHYNDTK 720 IQLLDLPGII EGASEGKGRG RQVIAVSKSA DIVLMVLDAS KSEGHRQILT KELEAVGLRL 780 NKRPPQIYFK KKKTGGISFN STLQLTHVDE KLCYQILHEY KIHNAEVLFR EDATVDDLID 840 VIEGNRKYMK CIYVYNKIDV VGIDDVDRLA RQPNSVVISC NMKLNLDRLL AKMWEAMGLV 900 RVYTKPQGQQ PDFTDPVVLS ADRGGCTVED FCNHIHRSLV KDVKYVLVWG TSARHYPQHC 960 GLAHMLEDED VVQIVKKKEK EEGGRGRFKS HSNAPARISD REKKAPLKT

Sequence ? help Back to Top

Protein Sequence Length: 1009 aa Download sequence

MDAIEAKTEV SVVPVTNTFG ALEKEITDPI VYQLVRVDGD GRLVPATQDE IMVVEDLLED  60
DKCEPKLVPD TRQISESCIT EGYLMARNLF QVPEEKSNVL VDAVPDLGNI DAPEKVAVHG  120
LNPFSELSDF DQSVRTETCF HSQDASNEDM PSTSAAGSSW KPDFSKLEGK ICLDNLTVKE  180
LQETFKATFG RETSVKDKQW LKRRITMGLT NSCDFSCTTF IIRDNVVVKN GEEQIYHRVK  240
SRISADSEDG VANSDSRGSL GDRDNRINDD ADLCGEDVST SAFESCNVTK NLDTEQRTAK  300
RARKPTKRYI EELSELESRE SSEKLASPDK ISRYRFACPQ THMRPTKNVR SNARPLVTRE  360
DSLGGSGIQI PFVSRIRRSR PRENFMPLLK LQPCGMDMVT RKVTSAFDVS GPQEDDKRNN  420
DLIKSSSSPG WTQQPLIAAC EKDDHYRGMK IVELENDVEP NDCSEYNSDD NVVTVPTQKG  480
GMRRKHHRPW TIDEVVKLVE GVARYGAGRW SEIKRLAFAS CSYRTSVDLK DKWRNLLKAS  540
FVQLPAEKGI LNSRKQASVP IPAAILRRVR ELADMQGQFP PGLSTGKSSG HSSSDRSVHD  600
ARSGFLFPTQ STGGEAESSV RSPEPRLSCR RITKYHLGQL KAKIAKLRTQ LLEPAKGSSG  660
AGEGFEVTKF GHGRVALIGF PSVGKSTLLT MLTGTHSEAA SYEFTTLTCI PGIIHYNDTK  720
IQLLDLPGII EGASEGKGRG RQVIAVSKSA DIVLMVLDAS KSEGHRQILT KELEAVGLRL  780
NKRPPQIYFK KKKTGGISFN STLQLTHVDE KLCYQILHEY KIHNAEVLFR EDATVDDLID  840
VIEGNRKYMK CIYVYNKIDV VGIDDVDRLA RQPNSVVISC NMKLNLDRLL AKMWEAMGLV  900
RVYTKPQGQQ PDFTDPVVLS ADRGGCTVED FCNHIHRSLV KDVKYVLVWG TSARHYPQHC  960
GLAHMLEDED VVQIVKKKEK EEGGRGRFKS HSNAPARISD REKKAPLKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	3e-91	MYB_related family protein