PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46789.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 165aa MW: 18881.7 Da PI: 9.9449

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46789.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.4e-05	85	107	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ Fs L H+r+H PHT46789.1 85 HECSICGMEFSMGQALGGHMRRH 107 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MMKRSREYDG QVEAQAMANC LMLLSSIDRD RRVNSFECKT CKRTFPSFQA LGGHRTSHKS 60 SLKSSSIDAE KPFHDKLSKK RKVIHECSIC GMEFSMGQAL GGHMRRHRAS PVNEIEESKE 120 RKIPVLKKSN SSKRIFCVDL NLTPDENDFQ LWHTASTAPV LRCFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	7e-32	C2H2 family protein