PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46618.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 409aa MW: 45210.7 Da PI: 7.8341

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.6	2.6e-09	286	333	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHT46618.1 286 SHSLAERVRREKISQRMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 333 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MDNDHFSNFG LHFEPKIPLN SVHSPQELNT DYFMNTHLDS NNSIDHQYAH FDSALSSVVS 60 SPIPSNSLSS NDASSLRELI GKLGSICSSP PAAFSNFNGV SCYSTPPKLL HMPIMNQMGP 120 FSCFGSRSFN DRTSQFELDN EGPRYGSGTA GRGNLTRILS SPCLVQNKSS GIMCEGLNLG 180 KISGTNEECS VSEQTQTRNV LNSRKRKAVS KLKTKNNVDG NGENENEKRA KSTQGNMGNN 240 GIVKMEEQKG SGDNGAEKEA KEKQKITEPP KDYIHVRARR GQATDSHSLA ERVRREKISQ 300 RMKLLQDLVP GCNKVTGKAL MLDEIINYVQ SLQRQVEFLS MKLASVNPRM DFHIDNLLHK 360 EISQPNVSLH QHVLPLDGHG QNLTQLPTIC EDDLQTIVQM GLTRTPTSN

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MDNDHFSNFG LHFEPKIPLN SVHSPQELNT DYFMNTHLDS NNSIDHQYAH FDSALSSVVS  60
SPIPSNSLSS NDASSLRELI GKLGSICSSP PAAFSNFNGV SCYSTPPKLL HMPIMNQMGP  120
FSCFGSRSFN DRTSQFELDN EGPRYGSGTA GRGNLTRILS SPCLVQNKSS GIMCEGLNLG  180
KISGTNEECS VSEQTQTRNV LNSRKRKAVS KLKTKNNVDG NGENENEKRA KSTQGNMGNN  240
GIVKMEEQKG SGDNGAEKEA KEKQKITEPP KDYIHVRARR GQATDSHSLA ERVRREKISQ  300
RMKLLQDLVP GCNKVTGKAL MLDEIINYVQ SLQRQVEFLS MKLASVNPRM DFHIDNLLHK  360
EISQPNVSLH QHVLPLDGHG QNLTQLPTIC EDDLQTIVQM GLTRTPTSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	3e-67	bHLH family protein