PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT46561.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 287aa MW: 33371.4 Da PI: 6.001 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158.9 | 2e-49 | 10 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGf+F P+deel+++yL +k++++k l l+ + e+d++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat sgyWkatgkd++vl+ ++ PHT46561.1 10 LPPGFKFCPSDEELICHYLYNKIANEKgLVLNGSLVEIDLHTCEPWQLPEVAKLNSSEWYFFSFRDRKYATGFRANRATISGYWKATGKDRTVLDPrTR 108 79*********************99996666667***************87788899**************************************9667 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfyk+rap+g ktdW+mhe+rl PHT46561.1 109 NIIGMRKTLVFYKNRAPNGIKTDWIMHEFRL 139 77***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MDLREIGATL PPGFKFCPSD EELICHYLYN KIANEKGLVL NGSLVEIDLH TCEPWQLPEV 60 AKLNSSEWYF FSFRDRKYAT GFRANRATIS GYWKATGKDR TVLDPRTRNI IGMRKTLVFY 120 KNRAPNGIKT DWIMHEFRLQ NPQVPLKEDW VLCRVFHKDK GHDNNNNNCT NKLNSQNKYE 180 AIVTCSNLSQ SPLHVNQHSL HCDISYQNPP HDEISQNSNA IHHQLFDLLV KDHHENTCLS 240 QCGQGDDQCG LLFDMQMDFQ EPYFQEEEIH SSLEDMRFDD ENSAVFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 4e-87 | NAC family protein |