PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46420.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 557aa MW: 61480.2 Da PI: 4.7332

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.6	7.2e-51	18	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp G+rF+Ptdeel+++yL+ k++g + ++ vi+evdi+k+ePwdLp + v+++++ew++F++ d+ky++g+r nratk+gyWkatgkd+++ ++kg PHT46420.1 18 LPIGYRFRPTDEELINHYLCLKINGCEEKV-GVIREVDICKFEPWDLPdlSVVESNDNEWFYFCPIDRKYQNGQRLNRATKRGYWKATGKDRTIATRKG 115 699**********************999.99**********96448888999************************************* PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLv+y grap+g++t+Wv+heyr+ PHT46420.1 116 AKIGMKKTLVYYIGRAPEGKRTNWVVHEYRA 146 ***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MAVLHEGNQL AVPPLNTLPI GYRFRPTDEE LINHYLCLKI NGCEEKVGVI REVDICKFEP 60 WDLPDLSVVE SNDNEWFYFC PIDRKYQNGQ RLNRATKRGY WKATGKDRTI ATRKGAKIGM 120 KKTLVYYIGR APEGKRTNWV VHEYRATDKS LDGSHPGQGA FVLCRLFKKN ELKQDENVES 180 SHLDEVELVS SPAVGKSTID DELSEAVAPS PIMESDSSKS NPQKTSGGKT HEARLPIDSR 240 GNSCTAGDTE DPMLDITSIA PDPELEELLD IFFEHSPEPL DWNFFSPLHS PPLHSQLQVD 300 FGSSDLHGPV TNEISCDQKD AQCQNGLNAL NTNEFFNSIL VSSDEISYED PGLELRSDLF 360 ASNSINIITR EPVKDSGTSS QSKSEVTQEP VRTDLFEPEL LLGNSGETAV MREVNSVAPA 420 VEQAFATPYV CNDHSTGNLN VLKNGHPGEV FSSAGSDGMQ VHSSLNLDES NSYSNVGTDS 480 GFGIIRRTRQ MQNQPDDGQL GSGTQGSTGR RIRYQLKLQA GRIECRMPTD SDQGGANHEG 540 LLTAYEVTLL NPSRKRG

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MAVLHEGNQL AVPPLNTLPI GYRFRPTDEE LINHYLCLKI NGCEEKVGVI REVDICKFEP  60
WDLPDLSVVE SNDNEWFYFC PIDRKYQNGQ RLNRATKRGY WKATGKDRTI ATRKGAKIGM  120
KKTLVYYIGR APEGKRTNWV VHEYRATDKS LDGSHPGQGA FVLCRLFKKN ELKQDENVES  180
SHLDEVELVS SPAVGKSTID DELSEAVAPS PIMESDSSKS NPQKTSGGKT HEARLPIDSR  240
GNSCTAGDTE DPMLDITSIA PDPELEELLD IFFEHSPEPL DWNFFSPLHS PPLHSQLQVD  300
FGSSDLHGPV TNEISCDQKD AQCQNGLNAL NTNEFFNSIL VSSDEISYED PGLELRSDLF  360
ASNSINIITR EPVKDSGTSS QSKSEVTQEP VRTDLFEPEL LLGNSGETAV MREVNSVAPA  420
VEQAFATPYV CNDHSTGNLN VLKNGHPGEV FSSAGSDGMQ VHSSLNLDES NSYSNVGTDS  480
GFGIIRRTRQ MQNQPDDGQL GSGTQGSTGR RIRYQLKLQA GRIECRMPTD SDQGGANHEG  540
LLTAYEVTLL NPSRKRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	2e-83	NAC family protein