PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT46380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HSF | ||||||||
Protein Properties | Length: 480aa MW: 54076 Da PI: 6.0648 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 111.8 | 4.9e-35 | 14 | 106 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d ++++++sws+++nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+Yg+kkv+ ++ weF+++ F +g+k+ll++i PHT46380.1 14 FLSKTYDMVDDLSTDSVVSWSKSNNSFVVWNVPEFTRHILPKYFKHNNFSSFVRQLNTYGYKKVDPDS---------WEFANEGFLRGHKHLLKTIS 101 9****************************************************************998.........******************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k + PHT46380.1 102 RRKPS 106 **976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 480 aa Download sequence |
MEGVTEIGNP PPPFLSKTYD MVDDLSTDSV VSWSKSNNSF VVWNVPEFTR HILPKYFKHN 60 NFSSFVRQLN TYGYKKVDPD SWEFANEGFL RGHKHLLKTI SRRKPSQMQV HQETASQVKS 120 LSVGSCVEVG KIGIEEEVER LKKDKSIHME ELVKLRQQQQ ATDHCLENVG QRLQLMEQRE 180 QQTMSFLAKA LQSPGFLAEL FHQQNESKRF ITGMNKKRRF PSQEEENYAG KQVSPLHNRQ 240 IVRYQPLLNE AAKALLQKLL KTNTSGWLET KVKNTHGFLT NHSRSFENTL ETGGISPHIS 300 GVTLPQLPTS SPSHLMSDSG FPFNSTLSVI PEIQYSPSLV PGEAKVPQFP ELNALNSQID 360 HVNPEFLGHG IDTLETLERT DLKRSETGNM PHIDTMQGIE DGVTSVPDGF STNDVISDEM 420 PKLPGINDIF WDQILLASPL IGYKDEIGSL ALEDGLAKEE DVPGVQESDC DKLKRICHLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16820.2 | 2e-97 | HSF family protein |