PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT46326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 159aa MW: 16838 Da PI: 4.8788 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 46.4 | 8.8e-15 | 2 | 40 | 64 | 102 |
NF-YC 64 lhaeenkrrtlkksdiaaavtrtdifdflvdivprdelk 102 +h+eenkrrtl+k+diaa+++rtd+fdflvdi+prde+k PHT46326.1 2 IHSEENKRRTLQKNDIAAVISRTDTFDFLVDIIPRDEVK 40 79**********************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MIHSEENKRR TLQKNDIAAV ISRTDTFDFL VDIIPRDEVK DEGVGLGVAP GGVPYYYPPL 60 GQPAPGGVML GRPAVPAGVV SGAVPGVVPG TVPGTVPGVD PSMYVPHLPF QVWKSMWQIS 120 EDHSYPSGGG SSSGQGTDDS QIEDGRVVHE MRFCGLALR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 9 | 15 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 3e-22 | NF-YC family protein |