PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT46193.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 317aa    MW: 34799.5 Da    PI: 9.9244
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT46193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.83e-14143187347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       PHT46193.1 143 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 187
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MSQPSIYLQI SLLSRSALFA LHSFFRTASI SQRVCLFPTT CIIHSFVDSS RRMSSACGDE  60
SSATEVTGAG EIMLFGVRVK VDPMRKSVSL NNLSQYEQPN INNSGGDSKN ESLKVAADEG  120
YASADDAVQH QSNCGRERKR GVPWTEEEHK LFLLGLQKVG KGDWRGISRN FVKTRTPTQV  180
ASHAQKYFLR RSNLNRRRRR SSLFDITTDS VSAMPKVEGE NKQEIPVLAP ATLPTVETTK  240
TNAFPVAPAV GPIMIPAQID ISRDSPTLLR RDHGNSSMLV GAVPMFSLPN PSPVIDLNAN  300
QNTTIEPSPL SLRLSVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19000.13e-56MYB_related family protein