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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PHT46144.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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| Family | NAC | ||||||||
| Protein Properties | Length: 317aa MW: 36156.3 Da PI: 6.5132 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 179.5 | 8.7e-56 | 5 | 132 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99
lppGfrFhP+deel+++yL +kv++ ++++ ++i++vd++k+ePwdLp+k++ +ekewyfFs++d+ky+tg r+nrat++gyWk+tgkdkev++ + +l
PHT46144.1 5 LPPGFRFHPSDEELITYYLSNKVSDFNFTC-RAIADVDLHKSEPWDLPAKASMGEKEWYFFSQKDRKYPTGLRTNRATEAGYWKTTGKDKEVYRGGVHL 102
79**************************99.89***************999999****************************************99999 PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129
vg+kktLvfy+grapkgekt+Wvmheyrle
PHT46144.1 103 VGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 132
****************************85 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 317 aa Download sequence |
MEENLPPGFR FHPSDEELIT YYLSNKVSDF NFTCRAIADV DLHKSEPWDL PAKASMGEKE 60 WYFFSQKDRK YPTGLRTNRA TEAGYWKTTG KDKEVYRGGV HLVGMKKTLV FYRGRAPKGE 120 KTNWVMHEYR LETNLGFKPS KEEWVVCRVF HKNSTAKKPQ PTSSSQQSDH EDQSTCDTYH 180 HTLPNEFGDM DLTNNFNLAT PIGNGSLTNI SLHNYSNIQE NMNIMNLAAL PSVNSLLFRA 240 LQLRGNYNNQ PRDDIIPATT ITSTSNYPFN IQPQGTISAF GVDFDPVLEP PSSSHVVFNP 300 LQPQGEQSYK LDSNIWE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G18400.1 | 1e-101 | NAC family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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