PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT46039.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 379aa MW: 42762.6 Da PI: 5.3051

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT46039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	117.2	1.6e-36	18	149	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkge 98 ppGfrF Ptd el+ +yL++kv+g+++ +i+evd+y+++P +L+ +++ee+ +yfF++r +k+++g+r+ r t+ +gyWk t k ++v++ k+ PHT46039.1 18 PPGFRFAPTDAELLLHYLRRKVNGESILP-GIIQEVDVYECNPYHLQ-GISTEEEFTYFFTSRGRKHPNGSRTDRNTRdgKGYWKMTSKLTNVYADKND 114 9***********************877.79**********8.677777788**************9987789********96433 PP NAM 99 l...vglkktLvfykgrapkge...ktdWvmheyrl 128 g k+tLv++ +apkg+ kt+W+mhe++l PHT46039.1 115 IssyLGKKNTLVYF-VKAPKGKkdpKTNWIMHEFEL 149 35669*****.55555554449******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MSGEQEVYYD DQWKQIIPPG FRFAPTDAEL LLHYLRRKVN GESILPGIIQ EVDVYECNPY 60 HLQGISTEEE FTYFFTSRGR KHPNGSRTDR NTRDGKGYWK MTSKLTNVYA DKNDISSYLG 120 KKNTLVYFVK APKGKKDPKT NWIMHEFELA QKKVDSPSTS SCPSQEKPFN DYVVCRVYNR 180 QVKDKRETDE EKDLIDSLIG SKPIMTDHND GEAAQVLPST KRKVEPKNET ITCDHPHAIA 240 MAMNSNYFYA SHELQAATML SNTMTSNNFD DTLKAITSSS SQDIVAPGEG VLGVEGISDQ 300 ARAIVYQEYM CQQSPHIAEK QNSGLVDHVE IGANDAQEGP HNATARRVDE IDYDNISLGL 360 ANNMGPVTMG DLWERYFGS

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MSGEQEVYYD DQWKQIIPPG FRFAPTDAEL LLHYLRRKVN GESILPGIIQ EVDVYECNPY  60
HLQGISTEEE FTYFFTSRGR KHPNGSRTDR NTRDGKGYWK MTSKLTNVYA DKNDISSYLG  120
KKNTLVYFVK APKGKKDPKT NWIMHEFELA QKKVDSPSTS SCPSQEKPFN DYVVCRVYNR  180
QVKDKRETDE EKDLIDSLIG SKPIMTDHND GEAAQVLPST KRKVEPKNET ITCDHPHAIA  240
MAMNSNYFYA SHELQAATML SNTMTSNNFD DTLKAITSSS SQDIVAPGEG VLGVEGISDQ  300
ARAIVYQEYM CQQSPHIAEK QNSGLVDHVE IGANDAQEGP HNATARRVDE IDYDNISLGL  360
ANNMGPVTMG DLWERYFGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	4e-36	NAC family protein