PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45975.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 244aa    MW: 26390.5 Da    PI: 5.2493
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC178.56.3e-56521561102
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie+a+dfknh+lPlar+kki+kadedv+misaeaPvl++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv
  PHT45975.1  52 QLQMFWNYQrqeIEQANDFKNHQLPLARVKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 150
                 89*****998899************************************************************************************** PP

       NF-YC  97 prdelk 102
                 prde+k
  PHT45975.1 151 PRDEVK 156
                 ***875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDNNTNTHQS PTDASAAAAA AAAATAAQSA SAVAAYPGQT PYHHLLQQQQ QQLQMFWNYQ  60
RQEIEQANDF KNHQLPLARV KKIMKADEDV RMISAEAPVL FAKACELFIL ELTIRSWLHA  120
EENKRRTLQK NDIAAAITRT DIFDFLVDIV PRDEVKDEGV GLGLGPGIVG PTASGVPYYY  180
PPLGQPAPGG VMLGRPAVPG VDPSMYVHPP PSQAWQSVWQ TSEEHSYPSG GGSSSGQGNV  240
DGQM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125131RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.12e-96NF-YC family protein