PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45946.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 270aa    MW: 30102.9 Da    PI: 7.0247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.4e-2090139255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa a+++a++k++g
  PHT45946.1  90 QYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFHTAEDAAVAYDEAALKFKG 139
                 69*******.**********94....45************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MNRIRHGKRA YESEEEKDSN NHMYSAARSE HDMSTMVAAL SQVMGNKSTN TNSSSSSALT  60
LAHQSSSTTT AAMQSQPQLN QQQGNERRRQ YRGVRQRPWG KWAAEIRDPK KAARVWLGTF  120
HTAEDAAVAY DEAALKFKGN KAKLNFPERV QCKTDQFGTT YLITASHQFP ASNFLPNYNS  180
NNADDLNFGV APSFYHPSAG FNPNALTSVE PSESSSMTSL IQQVSHVEQE PRYINHQQED  240
ENVLRFSSYF GTCSSSGPTE SSLEEFGDPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-28ERF family protein