PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT45689.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 113aa    MW: 12832.7 Da    PI: 7.5591
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT45689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.96.5e-0933107678
         NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeek..ew.yfFskrdkkyatgkrknrat 78 
                 rF+P deel+  yL k v gk++e+ ++i+ +d+y   +P d+   ++ + +  ++ y F++  kk++ gk+ +r++
  PHT45689.1  33 RFRPIDEELI-SYLLKFVCGKPIEC-DHIRMLDLYGNkKPCDIFDDLSPDGEftDVnYLFTHLTKKSTGGKNIKRMV 107
                 9*********.9*************.89******97549****74443333333445*********99999999965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MNGVHDFQLE MGTRSFKVRN AHRSQGIDLG HERFRPIDEE LISYLLKFVC GKPIECDHIR  60
MLDLYGNKKP CDIFDDLSPD GEFTDVNYLF THLTKKSTGG KNIKRMVLGG GGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.11e-08NAC family protein