PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45636.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 418aa MW: 46851 Da PI: 8.8087

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.4e-32	223	276	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PHT45636.1 223 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 276 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.3e-15	224	275	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PHT45636.1 224 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 275 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MELFPAQPDL SLQISPPNSK ASSTAWKSSM VTNNTNSTTN QDEMDLLFWK RALESRNSKS 60 DNNSNNSSSF FELSLSNIPN KPSPPHQLIN TTSHFHPTIQ NTHTNFIHQS LQQNQELSFL 120 RPIRGIPVYH QNPPPLPSPS IPVSHHNYPI FAHQTFDNTS TTAATLPIHS SGCCIRSFNN 180 NISNKTISNS SPIIPFHQSH HQAGLMRSRF LSRFPAKRTM RAPRMRWTSS LHARFVHAVE 240 LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT DRAAVPASSG QSEVFDNGSS 300 GDNSEDLMPD MENSRKSADL LSDQHAGRNN MHLQEKDYHG LWSNSSSRES WQLHGKHGDY 360 PGNMASLERT EKNQHKDMEA NAKCLSYDRI SGEVSSSSIT ETSPKKPNLE FTLGRPSE

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MELFPAQPDL SLQISPPNSK ASSTAWKSSM VTNNTNSTTN QDEMDLLFWK RALESRNSKS  60
DNNSNNSSSF FELSLSNIPN KPSPPHQLIN TTSHFHPTIQ NTHTNFIHQS LQQNQELSFL  120
RPIRGIPVYH QNPPPLPSPS IPVSHHNYPI FAHQTFDNTS TTAATLPIHS SGCCIRSFNN  180
NISNKTISNS SPIIPFHQSH HQAGLMRSRF LSRFPAKRTM RAPRMRWTSS LHARFVHAVE  240
LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT DRAAVPASSG QSEVFDNGSS  300
GDNSEDLMPD MENSRKSADL LSDQHAGRNN MHLQEKDYHG LWSNSSSRES WQLHGKHGDY  360
PGNMASLERT EKNQHKDMEA NAKCLSYDRI SGEVSSSSIT ETSPKKPNLE FTLGRPSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-68	G2-like family protein