PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45612.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 233aa MW: 26021.6 Da PI: 8.6678

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.8	1e-32	14	68	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH++Fv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl PHT45612.1 14 KPRLRWTAELHDQFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 68 79****************************************************8 PP
2	Myb_DNA-binding	68.7	1e-21	16	67	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ PHT45612.1 16 RLRWTAELHDQFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 67 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MYENDGVVMT RDPKPRLRWT AELHDQFVDA VTKLGGPDKA TPKSVLRLMG LKGLTLYHLK 60 SHLQKYRLGQ LAKKQNAAEA NKENCGDSGQ FSLHSSGPST SSLSMNFMQG EVVPVADAVM 120 CQIEVQKRLQ EQLQVQQKLQ MRIEAQGKYL QAILDKAQKK LPNMNSPSAP EATTAQLTAF 180 SSPLSNLLDY TVHGENRDNN IELLPTPNHI VEKEQKNDMN SINFDLNSRS SFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	5e-48	G2-like family protein