PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT45453.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 294aa MW: 33641.2 Da PI: 6.7158

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT45453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	3.9e-52	9	132	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 ppGfrFhPtdeelv++yL++k++++++ + +++e+d+yk++PwdLp+ + +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ s ++v PHT45453.1 9 PPGFRFHPTDEELVTHYLCRKCTSQPIAV-PIVAEIDLYKFDPWDLPELALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGS--PKAV 104 9***********************999.88***********7656689**********************************99..778 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy g+apkgekt+W+mheyrl PHT45453.1 105 GIKKALVFYAGKAPKGEKTNWIMHEYRL 132 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MTGADLQFPP GFRFHPTDEE LVTHYLCRKC TSQPIAVPIV AEIDLYKFDP WDLPELALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGTGYWK ATGADKPIGS PKAVGIKKAL VFYAGKAPKG 120 EKTNWIMHEY RLADVDRSAR KNNNSLRLDD WVLCRIYNKK GSIEKHRKVN TSYMDTVESP 180 EDKKPEILPP LPPQPPQQLH NDYFYLPSDS VPKIHSDSSC SEHVLSPDFT CEKEVQSEPR 240 LTDWEKMTID LPFNYMDATT GATTVDNSLL GSQFQSSYQM SPLQDMFMHL LKPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-135	NAC family protein